Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930533.1_cds_XP_016477562.1_69281
CDS Infomation

[gene=LOC107799017] [db_xref=GeneID:107799017] [protein=protein JASON-like isoform X2] [protein_id=XP_016477562.1] [location=complement(join(19500..19503,19601..19683,19768..20584,21014..21255,22443..22540,22637..22688,23343..23549))] [gbkey=CDS]
Sequence

ATGGTGTGGTCGTGGCTAGTGATCGGAGGAGATTGTGATCAATCGAACAATTCTAACCCT
AACGCCGTGATTACGGTGGTTCGTGCGGTGGTTGCGGCTGTCATGGGCTGTCTCTTCGGC
TGTTTCAAAATCAAGGATGTTACGGTTCCTAATGCTCCTTGTACCGATTCGCAATCGAAT
ATTGTCTCGCAATCTACTCCTACTAAGGAACCTTTGGTGTCTTGCAATAGAAGTCCACTA
TCTTCACTTTTAACTGAAGATAAAGATGAGACCAACACTTTGGGCTGCGAAGAAGTAGAG
AATCAGAGTTCGGATACACCTATGGCACAATTGGATGCAAATGATCTTAGGAATCAGGCC
AAGTTTCTCAAAGCTTGTGGAACCTTACATGAGACCCCTGCTGAAATTCGAACCTGCTCA
GTGAAATGCAAAGACCTGTCAGCTCCAGTGGAAGAAGTTGAACCTTTAAAATTCCATTCT
TGGCCCTCTGATGCAACATTTCAGAAGCTCATCTCAAATTTGCAACCTGATCAGCTCACA
CCTATCAGAACCGATGGAGTAAACAAGCAATCTGGTTCATTGGTGCATACGCCTAGCAGT
TGTTTGACGGATGGACAAAGTGGTCAAAGTTTCTCTAAGAACTCCATTGATGGCAGTGGG
AATTCTAACACTCCGATATTCATCAAGGTTAATGCTAATCTGGCTCTAAATGATAACACG
GCTTCAGCAGCTTTACCAGTCACTGCTCCAACTTCCCAGTACAGATACAGATCTGTCCAT
TTCGAAAGCGAGTCAGATCTATCTTCTATGTCATCAAAATGTATTTCATCTGAAACCAGT
CAAAGTTCCGAACAGTCTGAATCATCAGGCAACTATAATGCATCAAAGTATTCACCCTAT
CCAACCCCATTAAAGCTAACTGATGAGATGCAAACGCCTGGAACCATTTTTCCAGCATAT
TTGGACCACATGGGAATTGCTAAAACTGCACGGATCAGGTCTCAGTTTGTGTATCCTGTT
TTAAACCCTGTGGATAATGCCTCACAGTTGAATGAATTGTTAAATGAAGATTCTTACTCC
ACTCAAGATTCCAATTCTAGATTATTGTCCAGTCACACGACAGGTTCTGATCAAAGGCCT
GACGAAGCAAACCTTATATCAGACCTAGGAATATCCGGATTCACAGAAACTTCAGTTGAT
AAAGACTCAAAACCACTTTCAATCAATCAGGTGCAGAGTAAGCAGCATCTTGGTTCTGTT
TATGGTGGTGAAAATGTTCATTATGGCAGAACTCCTGGAGATAGACCTATCATTGGGTTG
GTTGCGGCTCATTGGAATGATGATGAAACTTCTCGTATATCTCCTAAATGGTGGGATGGA
AATGGGATTCCAAATTCTACTAACAAGTACAAAGAGGATCAAAAAGTTAGTTGGCATGCA
ACGCCATTTGAGGAGAGACTGGAGAAGGCATTGTCACAAGAGACTAATATTCCAGAAAGT
TAA

Peptide Sequence

PEP ID

XP_016477562.1
PEP Infomation

PREDICTED: protein JASON-like isoform X2 [Nicotiana tabacum]
Sequence

MVWSWLVIGGDCDQSNNSNPNAVITVVRAVVAAVMGCLFGCFKIKDVTVPNAPCTDSQSN
IVSQSTPTKEPLVSCNRSPLSSLLTEDKDETNTLGCEEVENQSSDTPMAQLDANDLRNQA
KFLKACGTLHETPAEIRTCSVKCKDLSAPVEEVEPLKFHSWPSDATFQKLISNLQPDQLT
PIRTDGVNKQSGSLVHTPSSCLTDGQSGQSFSKNSIDGSGNSNTPIFIKVNANLALNDNT
ASAALPVTAPTSQYRYRSVHFESESDLSSMSSKCISSETSQSSEQSESSGNYNASKYSPY
PTPLKLTDEMQTPGTIFPAYLDHMGIAKTARIRSQFVYPVLNPVDNASQLNELLNEDSYS
TQDSNSRLLSSHTTGSDQRPDEANLISDLGISGFTETSVDKDSKPLSINQVQSKQHLGSV
YGGENVHYGRTPGDRPIIGLVAAHWNDDETSRISPKWWDGNGIPNSTNKYKEDQKVSWHA
TPFEERLEKALSQETNIPES

Transcript Sequence

Gene sequence data has not been registered.